Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901297.1_cds_XP_016451315.1_45683
CDS Infomation

[gene=LOC107776019] [db_xref=GeneID:107776019] [protein=long chain acyl-CoA synthetase 8-like] [protein_id=XP_016451315.1] [location=complement(join(9011..9175,10069..10275,10605..10739,10828..10959,13312..13429,13603..13832,13952..14125,14219..14350,14884..15144,15246..15326,15420..15959))] [gbkey=CDS]
Sequence

ATGGAAGATTCTGAGGGAAGCAACCCATATATGAGTACAATGGAGAGACTGGCCAGCAAT
GATTATATCTCCAACTTCAAAAGTTCTGGGGTTGCTGGTGCAGTTATTATTGCCATTATT
ATACCAATATTACTGTCCATGGTACTAATGGGGAAGAAAAAGGGGAAACAGAGAGGAGTT
CCGGTTCAAGTTGGTGGCGACGCTGGTCTTGCAATGCGCAATGCTAAGTCAGCCGGATTA
GTTGAAGTTCCTTGGGAAGGGGCTGCAACTGTGGCAGCTCTATTTGAGCAGTCTTGTAAA
AAATATTCTAGTGAACGCTGTCTTGGAACTAGAAAACTAGTTAGCAGGGACTTTGTAACT
GCAAGTGATGGAAGGAAGTTTGAGAAACTTCACTTGGGGGAGTATCAGTGGGAGAGTTAT
GGACAAGTATTTGATCGTGCTTGCAACTTTGCCTCTGGTCTTGTTAAGTTGGGTCATGAT
GTGGAGACTCGTGCTGCTATCTTCGCAGAAAGTCGTGCGGAGTGGCTCATTGCCTTTCAG
GGATGCTTCCGGCAGAACATTACTGTTGTTACCATTTATGCTTCTTTGGGCGATGATGCA
CTTATATATTCACTCAATGAGACTCAAGCATCTACGTTGATATGTGATGCCAAGCAACTG
AAAAAGTTGGCTGCTGTTAGTTCTAGCCTGGAAACCATCAAGAATGTCATCTATTTTGAG
GACGAGACAGTGACAGATTCCACAAATATTGGCAGCTGGAGGGTGTCATCTTTCTCAGAA
ATTGAAAATCTGGGTAAAAATGGTTCTATTCAGCCAAGGCTGCCTGTCAAGAAAGATACT
GCTGTGATCATGTATACCAGTGGAAGTACAGGCTTACCTAAGGGTGTTATGATAACTCAT
GGCAACATTGTAGCCACTGCAGCTGGTGTTATGAGTGTGATTCCAAAAATTGGAAGCAGT
GATGTCTATTTGGCTTACCTCCCTTTAGCTCACGTCTTTGAGTTGGCTGCTGAGACTGTA
ATGCTGACTGCAGGTGCTTCCATTGGTTATGGCTCAGCTCTCACATTGACAGATACTTCT
AACAAAATCAAGAAGGGGACCCAGGGAGATGCTACAGCTTTAAAGCCTACATTAATGGCA
GCAGTTCCAGCCATTCTGGATCGTGTTAGGGATGGTGTTATGAAGAAGGTTGAGGAGAAG
GGAGGTTCTGCTAAGAAACTTTTCAACATTGCCTTTAAGCGTCGATTGGCTGCTATCGAA
GGTAGCTGGTTTGGAGCTTGGGGTCTAGAGAAACAAATATGGGATATAGTTATATTTAAA
AAGGTAAGGGCAGTGCTTGGAGGAGAAATTCGTTTCATGCTCTGCGGTGGTGCTCCTCTG
TCAGGAGATACTCAAAGATTTATCAACATCTGTATGGGAGCTCCTATTGGTCAAGGGTAT
GGACTAACGGAGACATTTGCTGGAGCTGCTTTCTCTGAGTGGGATGATCCTTCTGTTGGG
CGTGTTGGTCCACCTCTTCCTTGTAGCTACATAAAGCTTGTTACCTGGGAAGAAGGAGGT
TACACAATAGCTGACAAGCCTATGCCTCGGGGAGAAGTAGTTGTTGGTGGGTGCAGCATT
ACTGCTGGTTACTTCAACAATGAGGCCAAAACCAATGAGGTTTATAAGGTTGATGAAAGA
GGCATGCGCTGGTTCTACACTGGTGACATTGGAAGGTTTCATCCTGATGGATGCCTTGAA
ATTATTGATAGAAAGAAAGATATTGTTAAGCTTCAGCACGGGGAGTATATCTCACTTGGA
AAGGTTGAGGCAGCACTTCTATCAAGCAATTATGTGGAGAGCATAATGGTTTATGCGGAC
CCCTTCCACAATTATTGTGTAGCTTTAGTTGTCCCTTCACGCCAGGTGCTTGAGAAATGG
GCCCAGGAAAATGGCATCCAGCACAAGGATTTTTCCGAACTGTGCGACAAAGGAGAAGCA
GTCAACGAGATCAAGCAATCGCTTTCAAAGGTAGCAAAAGCTGCAAAATTGGACAAGTTT
GAGCTTCCTGCAAAGATCAAGTTAATACCAGAGTCTTGGACTCCCGAGTCTGGATTGGTT
ACTGCAGCTCTGAAATTGAAGCGAGAACCCCTGAAGGCTCGATATAAGAATGAGCTAGAA
AAGATGTATCAGTGA

Peptide Sequence

PEP ID

XP_016451315.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana tabacum]
Sequence

MEDSEGSNPYMSTMERLASNDYISNFKSSGVAGAVIIAIIIPILLSMVLMGKKKGKQRGV
PVQVGGDAGLAMRNAKSAGLVEVPWEGAATVAALFEQSCKKYSSERCLGTRKLVSRDFVT
ASDGRKFEKLHLGEYQWESYGQVFDRACNFASGLVKLGHDVETRAAIFAESRAEWLIAFQ
GCFRQNITVVTIYASLGDDALIYSLNETQASTLICDAKQLKKLAAVSSSLETIKNVIYFE
DETVTDSTNIGSWRVSSFSEIENLGKNGSIQPRLPVKKDTAVIMYTSGSTGLPKGVMITH
GNIVATAAGVMSVIPKIGSSDVYLAYLPLAHVFELAAETVMLTAGASIGYGSALTLTDTS
NKIKKGTQGDATALKPTLMAAVPAILDRVRDGVMKKVEEKGGSAKKLFNIAFKRRLAAIE
GSWFGAWGLEKQIWDIVIFKKVRAVLGGEIRFMLCGGAPLSGDTQRFINICMGAPIGQGY
GLTETFAGAAFSEWDDPSVGRVGPPLPCSYIKLVTWEEGGYTIADKPMPRGEVVVGGCSI
TAGYFNNEAKTNEVYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLG
KVEAALLSSNYVESIMVYADPFHNYCVALVVPSRQVLEKWAQENGIQHKDFSELCDKGEA
VNEIKQSLSKVAKAAKLDKFELPAKIKLIPESWTPESGLVTAALKLKREPLKARYKNELE
KMYQ

Transcript Sequence

Gene sequence data has not been registered.